BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A04LP1|AL426130
(814 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1310 1600 0.0
>3x_Contig1310
Length = 7790
Score = 1600 bits (807), Expect = 0.0
Identities = 814/815 (99%), Gaps = 1/815 (0%)
Strand = Plus / Plus
Query: 1 aggcaatctctcagtatgttcttgcttcacatgtactggctcatggtacgatttatttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 aggcaatctctcagtatgttcttgcttcacatgtactggctcatggtacgatttatttgt 105
Query: 61 cattggttttggaagaatcttctgttgcattggaacactgctgttgacacttggtactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 cattggttttggaagaatcttctgttgcattggaacactgctgttgacacttggtactat 165
Query: 121 ggtatgtggagatttagaatttgattcttctggtacgatagggaactgacgtttcaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ggtatgtggagatttagaatttgattcttctggtacgatagggaactgacgtttcaattc 225
Query: 181 ctgtaagttacccactagatcggtaagctccttcttaagcttattgttttccatcttaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ctgtaagttacccactagatcggtaagctccttcttaagcttattgttttccatcttaag 285
Query: 241 gatcttgatctctttcttcaaagcagttttggaacctggttttttctttggctccacggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gatcttgatctctttcttcaaagcagttttggaacctggttttttctttggctccacggg 345
Query: 301 ttgtgcagattgaatatgatctaaagtaacatccagctgttccattttcacctgtggctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttgtgcagattgaatatgatctaaagtaacatccagctgttccattttcacctgtggctt 405
Query: 361 aacttttgcgctttccattttagctgatggctttaaggtcggaattggcatgacttgttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aacttttgcgctttccattttagctgatggctttaaggtcggaattggcatgacttgttt 465
Query: 421 cttgcaagcagctggtgcaattttggcacggatgggcttaggctgggtatgagtgatcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 cttgcaagcagctggtgcaattttggcacggatgggcttaggctgggtatgagtgatcga 525
Query: 481 tgttgtctgttcaacttgtattgcttttgacttggcgtttgtagatttacagttagtcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tgttgtctgttcaacttgtattgcttttgacttggcgtttgtagatttacagttagtcaa 585
Query: 541 cgggatagttgatgatgatgatgatgatgaggagcttgc-gttggcactcctgtacggac 599
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 586 cgggatagttgatgatgatgatgatgatgaggagcttgcggttggcactcctgtacggac 645
Query: 600 tgcagtcgttgtagatgacgctactgtaccttgatcagaagaagagcaacttttaccaga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tgcagtcgttgtagatgacgctactgtaccttgatcagaagaagagcaacttttaccaga 705
Query: 660 atcaataacagtggcagccaagtgttttttcgatcccggtctcaaattctcaacttcttt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 atcaataacagtggcagccaagtgttttttcgatcccggtctcaaattctcaacttcttt 765
Query: 720 cactgattccacaggttcttgtttaatcttggcattagtacttgaagcagaagcaggcgt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 cactgattccacaggttcttgtttaatcttggcattagtacttgaagcagaagcaggcgt 825
Query: 780 agtggactctacagccatacccttgacatttgcca 814
|||||||||||||||||||||||||||||||||||
Sbjct: 826 agtggactctacagccatacccttgacatttgcca 860
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7583
Number of Sequences: 1807
Number of extensions: 7583
Number of successful extensions: 354
Number of sequences better than 1.0e-20: 1
length of query: 814
length of database: 10,358,551
effective HSP length: 16
effective length of query: 798
effective length of database: 10,329,639
effective search space: 8243051922
effective search space used: 8243051922
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)